Service / Data Download

Task 1: Robust privacy preserving data dissemination to known attacks

Data Sets

Case

Control

Case/control for Chromosome 2

case_chr2_29504091_30044866.txt

control_chr2_29504091_30044866.txt

Case/control for Chromosome 10

case_chr10_55127312_56292137.txt

control_chr10_55127312_56292137.txt

 

Genotype data sampled according to haplotype information of a region on chr2 and chr10 in hapmap database and modified according to allele frequency and biallele frequency of our data.

 

 

Task 2: Privacy preserving feature selection satisfying differential privacy

Name

File

Demographic data

Demographics.xls

SNP p-values

snp_pvalue.txt

Randomly selected 5000 SNPs

selected_5000.txt

SNP statistics

snpStat.txt

 

Inputs are partially simulated data derived from the PGP project, which has 201 samples covering 22 Chromesomes, each of them is linked to one record in the demographic data. The randomly selected 5000 SNPs are provided for testing the algorithms while the entire SNP p-value data are reserved for organizers to verify the performance.